Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS75309.1KEGG: reh:H16_A0776 7.7e-86 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00. (586 aa)    
Predicted Functional Partners:
EDS75550.1
KEGG: reh:H16_B0716 3.9e-98 dppF3; ABC-type transporter, ATPase component: PepT family; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.899
EDS75638.1
ABC transporter, ATP-binding protein; KEGG: hpa:HPAG1_0365 9.7e-47 multidrug resistance protein K01509; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  
0.597
EDS75308.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.548
EDS73754.1
KEGG: reh:H16_B0716 3.6e-88 dppF3; ABC-type transporter, ATPase component: PepT family; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.543
EDS75310.1
COG: COG4912 Predicted DNA alkylation repair enzyme.
       0.538
EDS75311.1
COG: COG4898 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
       0.521
EDS75763.1
Hypothetical protein; KEGG: pub:SAR11_0453 8.8e-05 aroK; shikimate kinase K00891.
   
 0.459
EDS74271.1
ABC transporter, ATP-binding protein; KEGG: spd:SPD_0049 5.3e-55 comA; competence factor transporting ATP-binding/permease protein ComA; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.455
EDS75312.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.438
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.424
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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