STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75310.1COG: COG4912 Predicted DNA alkylation repair enzyme. (219 aa)    
Predicted Functional Partners:
EDS75311.1
COG: COG4898 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
       0.751
EDS75312.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.615
EDS75309.1
KEGG: reh:H16_A0776 7.7e-86 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.538
EDS76052.1
Helicase C-terminal domain protein; KEGG: ftf:FTF0244 9.9e-180 DNA/RNA helicase K01529; COG: COG3886 Predicted HKD family nuclease; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.471
EDS76003.1
Trypsin; KEGG: bsu:BG11054 1.1e-70 yyxA, yycK; similar to serine protease Do; COG: COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
    0.406
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.