STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75327.1KEGG: lwe:lwe2649 1.2e-18 Cof-like hydrolase K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87. (278 aa)    
Predicted Functional Partners:
EDS74600.1
Cof-like hydrolase; KEGG: btl:BALH_4896 6.8e-30 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.805
EDS75871.1
Cof-like hydrolase; KEGG: sec:SC0837 9.6e-40 ybiV(1); putative hydrolase of the HAD superfamily K07757; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.801
EDS73980.1
Cof-like hydrolase; KEGG: btl:BALH_4896 9.6e-12 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily.
  
 
  0.801
EDS75326.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
       0.757
EDS75325.1
Transposase, Mutator family; Required for the transposition of the insertion element.
       0.600
ribF
KEGG: bar:GBAA3946 2.6e-60 ribC; riboflavin biosynthesis protein RibC K00861:K00953; COG: COG0196 FAD synthase; Psort location: Cytoplasmic, score: 8.87; Belongs to the ribF family.
   
 0.523
EDS75328.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
       0.490
EDS75324.1
Hypothetical protein.
       0.483
EDS75804.1
KEGG: efa:EF0020 4.3e-131 PTS system, mannose-specific IIAB components K02793:K02794; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score: 9.98.
    
  0.448
EDS73783.1
KEGG: efa:EF0020 4.3e-131 PTS system, mannose-specific IIAB components K02793:K02794; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score: 9.98.
    
  0.448
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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