STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75334.1Heavy metal-associated domain protein; KEGG: tde:TDE0008 7.3e-09 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: Cytoplasmic, score: 8.87. (119 aa)    
Predicted Functional Partners:
sodC
KEGG: ctc:CTC00590 6.5e-25 superoxide dismutase (Cu-Zn) K04565; COG: COG2032 Cu/Zn superoxide dismutase.
   
 0.988
cadA
Cadmium-exporting ATPase; KEGG: btk:BT9727_0506 3.5e-193 cation-transporting ATPase, P-type; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.862
EDS75574.1
Heavy metal-associated domain protein; KEGG: fnu:FN0259 4.5e-10 zinc-transporting ATPase K01534; COG: COG2608 Copper chaperone.
 
 
 0.855
EDS75314.1
Copper-exporting ATPase; KEGG: cpf:CPF_0534 2.0e-185 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.816
EDS75498.1
E1-E2 ATPase; KEGG: btl:BALH_0536 2.9e-48 cation-transporting ATPase, P-type; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.795
EDS75335.1
Hypothetical protein.
       0.741
EDS75336.1
Hypothetical protein.
       0.741
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
 0.661
EDS75313.1
COG: COG1937 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.658
EDS75333.1
Hypothetical protein.
       0.592
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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