STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS75384.1Polysaccharide biosynthesis protein; KEGG: crp:CRP_098 0.0096 leucyl-tRNA synthetase K01869; COG: NOG06398 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (516 aa)    
Predicted Functional Partners:
EDS75386.1
Glycosyltransferase, group 1 family protein; KEGG: ctc:CTC02262 1.4e-10 glycosyl transferase K00754; COG: NOG33476 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.819
EDS75385.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.816
EDS75375.1
Nucleotide sugar dehydrogenase; KEGG: tdn:Tmden_1968 1.4e-150 UDP-glucose 6-dehydrogenase K00012; COG: COG1004 Predicted UDP-glucose 6-dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.631
EDS75389.1
Glycosyltransferase, group 1 family protein; KEGG: mma:MM1142 1.6e-23 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.75.
 
    0.625
EDS75387.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.623
rfbA-2
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.621
EDS75391.1
Bacterial sugar transferase; KEGG: bce:BC5270 8.2e-50 undecaprenyl-phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.619
rfbB
KEGG: ljo:LJ1049 1.8e-132 dTDP-D-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.619
EDS75388.1
Bacterial transferase hexapeptide repeat protein; KEGG: bce:BC2447 9.9e-22 chloramphenicol acetyltransferase K00638; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 9.65.
  
  
 0.617
EDS75394.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: cno:NT01CX_1463 6.9e-101 spsC; spore coat polysaccharide biosynthesis protein SpsC K01726; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.611
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.