STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDS75393.1Putative phosphoribosylamine--glycine ligase; KEGG: ctc:CTC01706 1.1e-40 putative carbamoyl-phosphate synthase large chain K01954; COG: COG0439 Biotin carboxylase; Psort location: Cytoplasmic, score: 8.87. (413 aa)    
Predicted Functional Partners:
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.874
EDS75394.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: cno:NT01CX_1463 6.9e-101 spsC; spore coat polysaccharide biosynthesis protein SpsC K01726; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.868
EDS75391.1
Bacterial sugar transferase; KEGG: bce:BC5270 8.2e-50 undecaprenyl-phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.788
EDS75392.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: lpf:lpl2874 1.5e-08 lpxA; UDP-N-acetylglucosamine acyltransferase K00677; COG: COG0110 Acetyltransferase (isoleucine patch superfamily).
  
    0.775
EDS75389.1
Glycosyltransferase, group 1 family protein; KEGG: mma:MM1142 1.6e-23 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.75.
  
    0.766
EDS75390.1
Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_01144 1.6e-44 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
    0.766
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 
 0.753
EDS75388.1
Bacterial transferase hexapeptide repeat protein; KEGG: bce:BC2447 9.9e-22 chloramphenicol acetyltransferase K00638; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 9.65.
  
    0.601
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
 0.577
EDS75387.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.574
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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