STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75394.1DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: cno:NT01CX_1463 6.9e-101 spsC; spore coat polysaccharide biosynthesis protein SpsC K01726; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87; Belongs to the DegT/DnrJ/EryC1 family. (407 aa)    
Predicted Functional Partners:
EDS75391.1
Bacterial sugar transferase; KEGG: bce:BC5270 8.2e-50 undecaprenyl-phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.902
EDS73944.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: eca:ECA1420 1.9e-50 rfbP, asmG; undecaprenyl-phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.896
EDS75393.1
Putative phosphoribosylamine--glycine ligase; KEGG: ctc:CTC01706 1.1e-40 putative carbamoyl-phosphate synthase large chain K01954; COG: COG0439 Biotin carboxylase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.868
EDS74342.1
Polysaccharide biosynthesis protein; KEGG: lsl:LSL_0995 8.4e-167 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
 0.850
EDS75392.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: lpf:lpl2874 1.5e-08 lpxA; UDP-N-acetylglucosamine acyltransferase K00677; COG: COG0110 Acetyltransferase (isoleucine patch superfamily).
  
  
 0.849
EDS75390.1
Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_01144 1.6e-44 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.847
EDS74236.1
Polysaccharide biosynthesis protein; KEGG: lsl:LSL_0995 7.1e-170 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
 0.828
EDS75389.1
Glycosyltransferase, group 1 family protein; KEGG: mma:MM1142 1.6e-23 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.75.
  
  
 0.786
EDS75388.1
Bacterial transferase hexapeptide repeat protein; KEGG: bce:BC2447 9.9e-22 chloramphenicol acetyltransferase K00638; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 9.65.
  
  
 0.733
EDS74357.1
Polysaccharide biosynthesis protein; KEGG: saa:SAUSA300_0156 1.1e-111 cap5E; capsular polysaccharide biosynthesis protein Cap5E K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.699
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.