STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75398.1Hypothetical protein; COG: NOG28550 non supervised orthologous group. (168 aa)    
Predicted Functional Partners:
EDS75941.1
ABC-2 type transporter; COG: COG1228 Imidazolonepropionase and related amidohydrolases; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.676
EDS74656.1
Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.662
EDS75395.1
Transcription termination/antitermination factor NusG; COG: COG0250 Transcription antiterminator; Psort location: Cytoplasmic, score: 8.87.
 
     0.532
EDS75399.1
Hypothetical protein; KEGG: lsl:LSL_1772 3.5e-10 wecD; acetyltransferase K00680; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.516
EDS75472.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.477
EDS74697.1
Hypothetical protein; COG: NOG14194 non supervised orthologous group.
  
     0.472
EDS75942.1
KEGG: fnu:FN0376 8.7e-30 sfuC; iron(III)-transport ATP-binding protein sfuC K02010; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.467
EDS75943.1
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 1.0e-07 yhdM; Zn(II)-responsive regulator of ZntA; COG: COG0789 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.444
EDS74496.1
Hypothetical protein; COG: NOG16911 non supervised orthologous group.
  
     0.402
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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