STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75400.1KEGG: tcx:Tcr_1209 8.0e-07 exodeoxyribonuclease VII, large subunit K03601; COG: NOG21997 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (226 aa)    
Predicted Functional Partners:
EDS75399.1
Hypothetical protein; KEGG: lsl:LSL_1772 3.5e-10 wecD; acetyltransferase K00680; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
    0.485
EDS75401.1
Hypothetical protein; COG: NOG19288 non supervised orthologous group.
       0.478
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.433
EDS75979.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 7.6e-79 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.415
EDS75119.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: btk:BT9727_3012 6.8e-62 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.70.
    
   0.415
EDS74712.1
KEGG: ctc:CTC00159 2.4e-36 sensory transduction protein kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 9.36.
    
   0.415
EDS74557.1
KEGG: bsu:BG14132 3.3e-53 cssS, yvqB; two-component sensor histidine kinase. potential cognate response regulator is cssR K07650; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
    
   0.415
EDS74583.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bca:BCE_2676 8.6e-55 two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.415
EDS74326.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cac:CAC0225 1.3e-37 sensory transduction histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
    
   0.415
EDS74447.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcl:ABC1700 1.5e-09 stage II sporulation protein J, sporulation kinase A; COG: NOG34205 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
    
   0.415
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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