Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS75424.1Site-specific recombinase, phage integrase family; KEGG: bcc:BCc_265 0.00096 polA; 5'-3' exonuclease domain of DNA polymerase I K00961; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family. (380 aa)    
Predicted Functional Partners:
EDS75191.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.578
EDS75426.1
PAP2 family protein; KEGG: btk:BT9727_4494 5.4e-14 pgpB; phosphatidylglycerophosphatase B K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.499
EDS75397.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
  
     0.498
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
 
 
   0.484
EDS75423.1
Hypothetical protein; KEGG: hac:Hac_1110 0.0012 hsdR_fragment_4; type I restriction enzyme R protein fragment 4 K01152; COG: COG0419 ATPase involved in DNA repair.
       0.434
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.425
EDS75112.1
Acetyltransferase, GNAT family; KEGG: fnu:FN1294 4.8e-13 ribosomal-protein-alanine acetyltransferase K00676; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.424
rpsU
COG: COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.409
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
 
 0.401
rpmE
Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
    
 
 0.401
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.