STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75425.1Hypothetical protein; KEGG: tma:TM1254 2.9e-11 beta-phosphoglucomutase, putative K01838; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: CytoplasmicMembrane, score: 9.26. (507 aa)    
Predicted Functional Partners:
EDS75426.1
PAP2 family protein; KEGG: btk:BT9727_4494 5.4e-14 pgpB; phosphatidylglycerophosphatase B K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EDS74179.1
Ser/Thr phosphatase family protein; KEGG: hso:HS_0581 2.1e-07 icc; 3',5'-cyclic-nucleotide phosphodiesterase K03651; COG: COG1409 Predicted phosphohydrolases.
  
    0.752
EDS76129.1
Hypothetical protein; KEGG: btk:BT9727_2838 4.2e-18 methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: CytoplasmicMembrane, score: 7.63.
 
    0.708
EDS75646.1
Hypothetical protein; KEGG: cpr:CPR_0949 9.9e-09 chitinase B K01183; COG: COG3469 Chitinase.
  
    0.676
EDS75075.1
Hypothetical protein; COG: COG0457 FOG: TPR repeat; Psort location: Cytoplasmic, score: 8.87.
  
 
   0.611
EDS75129.1
Putative septation ring formation regulator EzrA; KEGG: fnu:FN0522 3.9e-11 exonuclease SBCC K03546; COG: COG4477 Negative regulator of septation ring formation; Psort location: Cytoplasmic, score: 8.87.
  
     0.564
EDS75610.1
Putative flagellar protein FliS; KEGG: fnu:FN0522 0.0010 exonuclease SBCC K03546; COG: NOG11397 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.539
EDS76042.1
Hypothetical protein; COG: COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; Psort location: Cytoplasmic, score: 8.87.
  
    0.535
EDS75737.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.533
EDS74171.1
Thiamine transporter protein (Thia_YuaJ); COG: COG3859 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.532
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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