STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75440.1Transcriptional regulator, DeoR family; COG: COG1349 Transcriptional regulators of sugar metabolism; Psort location: Cytoplasmic, score: 8.87. (253 aa)    
Predicted Functional Partners:
EDS75802.1
KEGG: lmf:LMOf2365_0442 1.4e-20 PTS system, fructose-specific, IIA component K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score: 8.87.
 
  
 0.738
EDS75441.1
Nitroreductase family protein; KEGG: fnu:FN1223 1.1e-17 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score: 8.87.
     
 0.737
pfkB
1-phosphofructokinase; KEGG: cno:NT01CX_1725 1.1e-79 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score: 8.87; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.726
EDS75580.1
KEGG: cpr:CPR_0550 6.2e-171 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.704
EDS75442.1
Hypothetical protein; COG: COG4319 Ketosteroid isomerase homolog; Psort location: Cytoplasmic, score: 8.87.
       0.697
EDS75443.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.697
EDS75439.1
KEGG: sdy:SDY_3786 7.7e-157 pflD; formate acetyltransferase 2 K00656; COG: COG1882 Pyruvate-formate lyase; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.609
EDS75437.1
KEGG: lpl:lp_2600 1.1e-56 tal1; transaldolase K01636; COG: COG0176 Transaldolase; Psort location: Cytoplasmic, score: 8.87.
  
    0.574
EDS75438.1
Glycyl-radical enzyme activating protein family protein; KEGG: tko:TK0290 3.5e-58 pyruvate-formate lyase-activating enzyme K04069; COG: COG1180 Pyruvate-formate lyase-activating enzyme; Psort location: Cytoplasmic, score: 9.98.
  
    0.563
rpiB
KEGG: gka:GK3371 5.4e-46 ribose 5-phosphate isomerase K01808; COG: COG0698 Ribose 5-phosphate isomerase RpiB; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.490
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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