STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75464.1Response regulator receiver domain protein; KEGG: ava:Ava_B0209 4.8e-13 two component transcriptional regulator, LuxR family K02479; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score: 8.87. (180 aa)    
Predicted Functional Partners:
EDS75463.1
KEGG: btl:BALH_3368 7.8e-11 adaA; transcriptional regulator, AraC family K00567; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
     0.967
EDS75465.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 1.4e-34 yesM; two-component sensor kinase YesM K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 0.896
EDS75466.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.870
EDS76002.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ban:BA4832 1.4e-56 phoR; sensory box histidine kinase PhoR K07636; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
 0.588
EDS73808.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C4496 2.2e-26 cpxR; transcriptional regulatory protein CpxR K07662; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   
 0.540
EDS75119.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: btk:BT9727_3012 6.8e-62 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.70.
 
 
 
 0.530
EDS74712.1
KEGG: ctc:CTC00159 2.4e-36 sensory transduction protein kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 9.36.
 
 
 
 0.518
EDS76001.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 6.2e-36 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   
 0.486
EDS74715.1
KEGG: rha:RHA1_ro05622 3.6e-33 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   
 0.479
EDS75467.1
Transposase-like protein; COG: COG1943 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
       0.472
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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