STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75465.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 1.4e-34 yesM; two-component sensor kinase YesM K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (486 aa)    
Predicted Functional Partners:
EDS75466.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
 
 0.975
EDS75464.1
Response regulator receiver domain protein; KEGG: ava:Ava_B0209 4.8e-13 two component transcriptional regulator, LuxR family K02479; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.935
EDS75463.1
KEGG: btl:BALH_3368 7.8e-11 adaA; transcriptional regulator, AraC family K00567; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.888
EDS75013.1
Hypothetical protein; COG: COG1840 ABC-type Fe3+ transport system, periplasmic component.
   
   0.844
EDS75825.1
Sugar-binding domain protein; KEGG: msm:MSMEG_3095 4.0e-25 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.746
EDS74263.1
LytTr DNA-binding domain protein; KEGG: pha:PSHAa0913 9.3e-06 chemotaxis protein; COG: COG3279 Response regulator of the LytR/AlgR family.
 
 
 0.660
EDS74014.1
LytTr DNA-binding domain protein; KEGG: wbr:WGLp088 0.0013 rne; ribonucleases G and E; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.633
EDS74015.1
Hypothetical protein; KEGG: sep:SE1637 6.6e-15 accessory gene regulator C K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.631
EDS74858.1
LytTr DNA-binding domain protein; KEGG: chu:CHU_3042 0.00019 two-component response regulator K02483; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.598
EDS73791.1
KEGG: bcz:BCZK3497 2.1e-12 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.586
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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