STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75466.1Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component. (314 aa)    
Predicted Functional Partners:
EDS75465.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 1.4e-34 yesM; two-component sensor kinase YesM K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.979
EDS75464.1
Response regulator receiver domain protein; KEGG: ava:Ava_B0209 4.8e-13 two component transcriptional regulator, LuxR family K02479; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score: 8.87.
 
     0.870
EDS75358.1
KEGG: reh:H16_A1397 1.5e-64 ABC-type transporter, ATPase component; COG: COG1101 ABC-type uncharacterized transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.842
EDS75463.1
KEGG: btl:BALH_3368 7.8e-11 adaA; transcriptional regulator, AraC family K00567; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
     0.718
EDS74395.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 1.2e-207 beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.73.
  
     0.624
EDS73694.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: cpe:CPE1364 2.8e-27 beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.73.
  
     0.601
EDS74326.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cac:CAC0225 1.3e-37 sensory transduction histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 
 0.598
EDS75969.1
Hypothetical protein; KEGG: cpf:CPF_0184 8.8e-12 nagH; hyaluronidase K01197; COG: NOG23393 non supervised orthologous group; Psort location: Extracellular, score: 9.73.
  
     0.585
EDS74447.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcl:ABC1700 1.5e-09 stage II sporulation protein J, sporulation kinase A; COG: NOG34205 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
 
 
 0.570
EDS75979.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 7.6e-79 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.497
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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