STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75059.1Peptidase, M50 family; KEGG: bca:BCE_4538 3.3e-21 spoIVFB; stage IV sporulation protein FB K06402; COG: COG1994 Zn-dependent proteases. (247 aa)    
Predicted Functional Partners:
EDS75062.1
Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
 
     0.871
EDS75060.1
Hypothetical protein.
       0.783
EDS75779.1
COG: COG2834 Outer membrane lipoprotein-sorting protein.
  
    0.758
EDS75152.1
Polysaccharide biosynthesis protein; KEGG: cac:CAC3205 0.0061 spoIIE; stage II sporulation protein E, serine phosphatase family K06382; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.733
EDS73819.1
KEGG: oih:OB0074 1.3e-40 stage II sporulation protein E K06382; COG: COG2208 Serine phosphatase RsbU, regulator of sigma subunit; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.731
spoIIP
Stage II sporulation protein P; COG: NOG06343 non supervised orthologous group.
  
  
 0.721
EDS74606.1
Putative spore coat protein GerQ; COG: NOG14257 non supervised orthologous group.
  
     0.711
mreC
COG: COG1792 Cell shape-determining protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.707
cotE
Spore coat protein E; COG: NOG09743 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.702
EDS74947.1
Putative SpoIVB peptidase; KEGG: btl:BALH_3781 6.9e-53 spoIVB; stage IV sporulation protein B; COG: COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
   
 0.685
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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