STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75060.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
EDS75059.1
Peptidase, M50 family; KEGG: bca:BCE_4538 3.3e-21 spoIVFB; stage IV sporulation protein FB K06402; COG: COG1994 Zn-dependent proteases.
       0.790
minD
KEGG: pen:PSEEN1445 2.9e-47 minD; septum site-determining protein MinD; COG: COG2894 Septum formation inhibitor-activating ATPase; Psort location: CytoplasmicMembrane, score: 7.80.
       0.646
EDS75062.1
Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
       0.643
mreC
COG: COG1792 Cell shape-determining protein; Psort location: Cytoplasmic, score: 8.87.
       0.643
EDS75063.1
Hypothetical protein; COG: COG2891 Cell shape-determining protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.637
rpmA
COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.497
EDS75057.1
Hypothetical protein; KEGG: pha:PSHAa2725 0.0056 maeB; NADP-dependent malic enzyme (NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal)) K00029; COG: COG2868 Predicted ribosomal protein.
       0.497
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.497
cgtA
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.406
EDS75065.1
COG: COG2003 DNA repair proteins; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0758 family.
       0.402
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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