STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sasPASmall, acid-soluble spore protein A; COG: NOG16862 non supervised orthologous group; Psort location: Extracellular, score: 8.82. (72 aa)    
Predicted Functional Partners:
gpr
KEGG: bli:BL02089 5.7e-42 gpr; spore protease K06012; COG: NOG08575 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.766
EDS74606.1
Putative spore coat protein GerQ; COG: NOG14257 non supervised orthologous group.
  
    0.763
cotE
Spore coat protein E; COG: NOG09743 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.759
EDS74432.1
Hypothetical protein; COG: NOG05963 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.80.
  
     0.746
cwlJ
KEGG: bcz:BCZK2341 4.5e-26 cwlJ; cell wall hydrolase K01449; COG: COG3773 Cell wall hydrolyses involved in spore germination; Psort location: Cytoplasmic, score: 8.87.
  
    0.727
EDS73819.1
KEGG: oih:OB0074 1.3e-40 stage II sporulation protein E K06382; COG: COG2208 Serine phosphatase RsbU, regulator of sigma subunit; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.719
EDS74431.1
Putative stage V sporulation protein AE; COG: NOG13202 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.715
EDS74947.1
Putative SpoIVB peptidase; KEGG: btl:BALH_3781 6.9e-53 spoIVB; stage IV sporulation protein B; COG: COG0750 Predicted membrane-associated Zn-dependent proteases 1.
  
    0.714
spoVAC
Stage V sporulation protein AC; COG: NOG09745 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26.
  
  
 0.714
spoVAD
Stage V sporulation protein AD; COG: NOG06312 non supervised orthologous group.
  
  
 0.713
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.