STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75138.1Putative transposase, IS4 family; KEGG: fnu:FN0522 0.00026 exonuclease SBCC K03546; COG: COG5421 Transposase; Psort location: Cytoplasmic, score: 8.87. (577 aa)    
Predicted Functional Partners:
EDS74772.1
Hypothetical protein; COG: COG5421 Transposase.
  
     0.775
EDS74190.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87.
  
     0.556
EDS75969.1
Hypothetical protein; KEGG: cpf:CPF_0184 8.8e-12 nagH; hyaluronidase K01197; COG: NOG23393 non supervised orthologous group; Psort location: Extracellular, score: 9.73.
  
     0.537
EDS75137.1
Acetyltransferase, GNAT family; KEGG: dar:Daro_0099 1.3e-11 GCN5-related N-acetyltransferase:carbonic anhydrase, prokaryotic and plant K01673; COG: KOG3139 N-acetyltransferase.
       0.524
EDS75976.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1876 3.9e-38 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Extracellular, score: 9.55.
  
     0.515
EDS74395.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 1.2e-207 beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.73.
  
     0.449
EDS74691.1
BNR/Asp-box repeat protein; KEGG: rba:RB3353 4.6e-10 sialidase [precursor] K01186; COG: NOG23393 non supervised orthologous group; Psort location: Extracellular, score: 9.98.
  
     0.414
EDS76112.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.410
EDS75812.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.410
EDS75642.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.410
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.