STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75180.1GDSL-like protein. (254 aa)    
Predicted Functional Partners:
EDS75181.1
Polysaccharide biosynthesis protein; KEGG: pto:PTO1406 0.0053 NADH-quinone oxidoreductase chain J K00339; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.777
EDS75182.1
Hypothetical protein; COG: NOG19789 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EDS75183.1
KEGG: cno:NT01CX_0100 2.1e-14 glycosyl transferase, group 1 family protein K00754; COG: COG0438 Glycosyltransferase.
       0.741
EDS75178.1
KEGG: cpf:CPF_0917 6.1e-38 LicD family protein K07271; COG: COG3475 LPS biosynthesis protein; Psort location: Cytoplasmic, score: 8.87.
       0.634
EDS75179.1
KEGG: chu:CHU_0890 1.5e-41 A-glycosyltransferase, glycosyltransferase family 4 protein K00754; COG: COG0438 Glycosyltransferase.
       0.634
EDS76081.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
  0.580
EDS74739.1
TIGR02677 family protein; KEGG: fnu:FN0522 0.0032 exonuclease SBCC K03546; COG: NOG04769 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  0.580
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
  
  0.580
EDS74318.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
  
  0.580
tagD
KEGG: bld:BLi03818 1.2e-50 tagD; glycerol-3-phosphate cytidylyltransferase; RBL05030 K00980; COG: COG0615 Cytidylyltransferase; Psort location: Cytoplasmic, score: 9.98.
       0.554
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.