STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75187.1Bacterial sugar transferase; KEGG: cpe:CPE0614 2.6e-37 rfbP; probable undecaprenyl phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.49. (203 aa)    
Predicted Functional Partners:
EDS75186.1
Glycosyltransferase, group 1 family protein; KEGG: bcz:BCZK4973 3.4e-28 wciJ; glycosyl transferase, group 1; possible capsular polysaccharide biosynthesis protein K00754; COG: COG0438 Glycosyltransferase.
 
  
 0.958
EDS75185.1
Polysaccharide biosynthesis protein; KEGG: saa:SAUSA300_0156 4.8e-109 cap5E; capsular polysaccharide biosynthesis protein Cap5E K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.826
EDS75184.1
Glycosyltransferase, group 1 family protein; KEGG: ava:Ava_1041 1.8e-29 glycosyl transferase, group 1 K00703; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.804
EDS75188.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: cgb:cg0439 5.5e-12 putative acetyl transferase protein K00680; COG: COG0110 Acetyltransferase (isoleucine patch superfamily).
    
 0.789
EDS74973.1
Chain length determinant protein; KEGG: chu:CHU_0880 6.0e-28 wzc; tyrosine-protein kinase K08252; COG: COG3944 Capsular polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.779
EDS74974.1
Chain length determinant protein; KEGG: ava:Ava_1045 1.3e-29 lipopolysaccharide biosynthesis K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.776
EDS73933.1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 3.5e-106 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.710
EDS75181.1
Polysaccharide biosynthesis protein; KEGG: pto:PTO1406 0.0053 NADH-quinone oxidoreductase chain J K00339; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.584
EDS74233.1
Capsular exopolysaccharide family; KEGG: bcl:ABC3815 5.3e-39 tyrosine-protein kinase K00903; COG: COG0489 ATPases involved in chromosome partitioning; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.577
EDS75176.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 4.6e-72 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.537
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.