STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75206.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (144 aa)    
Predicted Functional Partners:
EDS75302.1
LytTr DNA-binding domain protein; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 8.87.
  
     0.525
EDS75207.1
Flavodoxin; COG: COG0716 Flavodoxins.
       0.480
EDS75208.1
Riboflavin biosynthesis protein RibD C-terminal domain protein; KEGG: mja:MJ0671 1.4e-15 5-amino-6-(5-phosphoribosylamino)uracil reductase K00082; COG: COG1985 Pyrimidine reductase, riboflavin biosynthesis.
       0.480
EDS75209.1
Cupin domain protein; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
       0.477
EDS75121.1
Hypothetical protein; COG: NOG10992 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.457
EDS75576.1
Hypothetical protein; COG: NOG16848 non supervised orthologous group.
  
     0.437
EDS75339.1
FeoA domain protein; COG: COG1918 Fe2+ transport system protein A.
  
     0.408
EDS74656.1
Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.401
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.