STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75207.1Flavodoxin; COG: COG0716 Flavodoxins. (175 aa)    
Predicted Functional Partners:
EDS74401.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: cgl:NCgl1003 6.8e-78 cgl1048; aldo/keto reductase K03378; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score: 8.87.
      0.903
EDS75323.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpf:CPF_0184 6.6e-07 nagH; hyaluronidase K01197; COG: NOG38526 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
  
   0.847
EDS75209.1
Cupin domain protein; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
     0.816
EDS75208.1
Riboflavin biosynthesis protein RibD C-terminal domain protein; KEGG: mja:MJ0671 1.4e-15 5-amino-6-(5-phosphoribosylamino)uracil reductase K00082; COG: COG1985 Pyrimidine reductase, riboflavin biosynthesis.
       0.779
EDS75520.1
Kinase domain protein; KEGG: lmo:lmo1820 5.3e-110 similar to putative serine/threonine-specific protein kinase K08884; COG: COG2815 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.567
EDS74077.1
Hypothetical protein; KEGG: pfa:PFE0765w 2.8e-05 phosphatidylinositol 3-kinase, putative K00914; COG: NOG31176 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.564
EDS75210.1
Hypothetical protein; KEGG: bcc:BCc_198 0.0039 pykA; PykA K00873; Psort location: Cytoplasmic, score: 8.87.
       0.512
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.484
EDS75206.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.480
EDS75259.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: rso:RSc0215 1.7e-33 RS00647; short chain dehydrogenase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
  0.473
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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