STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75223.1ABC transporter, permease protein; KEGG: cdi:DIP0495 2.8e-09 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG0687 Spermidine/putrescine-binding periplasmic protein; Psort location: CytoplasmicMembrane, score: 10.00. (616 aa)    
Predicted Functional Partners:
EDS75224.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 1.5e-09 molybdenum ABC transporter ModB K06022; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.999
EDS75015.1
KEGG: mcp:MCAP_0202 6.5e-57 spermidine/putrescine ABC transporter, ATP-binding protein K02052; COG: COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.973
EDS76076.1
KEGG: ctc:CTC00579 2.8e-127 sbcC; exonuclease sbcC K03546; COG: COG0419 ATPase involved in DNA repair; Psort location: Extracellular, score: 7.62.
    
 0.897
EDS75226.1
Cupin domain protein; KEGG: pab:PAB0818 0.0061 manC; mannose-1-phosphate guanylyltransferase K00971; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.871
EDS75013.1
Hypothetical protein; COG: COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
 
 0.866
EDS75014.1
KEGG: ava:Ava_0243 1.8e-05 molybdate ABC transporter, permease protein K02018; COG: COG1178 ABC-type Fe3+ transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.849
EDS75765.1
KEGG: noc:Noc_2142 1.0e-33 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
  0.755
EDS75920.1
KEGG: lwe:lwe2158 4.7e-38 ABC transporter, ATP-binding protein K06020; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
  0.755
EDS75930.1
KEGG: rha:RHA1_ro06063 9.0e-28 probable ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
  0.755
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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