STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAPolyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (347 aa)    
Predicted Functional Partners:
EDS75223.1
ABC transporter, permease protein; KEGG: cdi:DIP0495 2.8e-09 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG0687 Spermidine/putrescine-binding periplasmic protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EDS75224.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 1.5e-09 molybdenum ABC transporter ModB K06022; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EDS74591.1
KEGG: lwe:lwe1990 2.0e-48 ABC transporter, ATP-binding protein K06020; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
 
0.916
EDS74256.1
KEGG: reh:H16_A0776 2.5e-71 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
   
0.901
EDS74850.1
ABC transporter transmembrane region; KEGG: cch:Cag_0453 7.4e-88 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
   
0.900
EDS74065.1
KEGG: reh:H16_A0776 4.0e-89 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
   
0.900
EDS74257.1
KEGG: reh:H16_A0776 2.1e-76 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
   
0.898
EDS73876.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1962 1.2e-64 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
   
0.897
EDS74064.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 5.9e-63 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
   
0.889
EDS75014.1
KEGG: ava:Ava_0243 1.8e-05 molybdate ABC transporter, permease protein K02018; COG: COG1178 ABC-type Fe3+ transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.869
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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