STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75228.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (126 aa)    
Predicted Functional Partners:
EDS75227.1
KEGG: cno:NT01CX_0626 1.1e-70 prephenate dehydrogenase K00210; COG: COG0287 Prephenate dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
       0.773
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
       0.719
EDS75230.1
LysM domain protein; KEGG: aeh:Mlg_1995 5.1e-06 lytic transglycosylase, catalytic K08307; COG: COG3409 Putative peptidoglycan-binding domain-containing protein.
       0.613
EDS75223.1
ABC transporter, permease protein; KEGG: cdi:DIP0495 2.8e-09 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG0687 Spermidine/putrescine-binding periplasmic protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.524
EDS75224.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 1.5e-09 molybdenum ABC transporter ModB K06022; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score: 10.00.
       0.524
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
       0.524
EDS75226.1
Cupin domain protein; KEGG: pab:PAB0818 0.0061 manC; mannose-1-phosphate guanylyltransferase K00971; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
       0.524
EDS75231.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.2e-32 tagB; teichoic acid biosynthesis protein B K01005; COG: COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
       0.467
EDS75232.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: sab:SAB0193 1.1e-77 teichoic acid biosynthesis protein F; COG: COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; Psort location: Cytoplasmic, score: 8.87.
       0.467
EDS75233.1
Glycosyltransferase, group 2 family protein; KEGG: bcl:ABC3103 2.3e-86 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; COG: COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; Psort location: Cytoplasmic, score: 8.87.
       0.434
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.