STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagD-2KEGG: bcl:ABC3101 5.6e-51 tagD; glycerol-3-phosphate cytidylyltransferase K00980; COG: COG0615 Cytidylyltransferase; Psort location: Cytoplasmic, score: 9.98. (128 aa)    
Predicted Functional Partners:
gpsA
KEGG: bce:BC1505 5.7e-74 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057; COG: COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.940
EDS75231.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.2e-32 tagB; teichoic acid biosynthesis protein B K01005; COG: COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
 
  
 0.911
EDS75233.1
Glycosyltransferase, group 2 family protein; KEGG: bcl:ABC3103 2.3e-86 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; COG: COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.908
EDS75232.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: sab:SAB0193 1.1e-77 teichoic acid biosynthesis protein F; COG: COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.904
EDS76027.1
Oxidoreductase, NAD-binding domain protein; KEGG: hsa:27294 3.1e-27 DHDH; dihydrodiol dehydrogenase (dimeric) K00212; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
    0.897
EDS75236.1
ABC-2 type transporter; COG: COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.807
EDS75235.1
ABC transporter, ATP-binding protein; KEGG: baa:BA_0359 8.0e-75 ABC transporter K01990; COG: COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
     
 0.805
EDS75582.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_1136 2.9e-77 oxidoreductase (putative); COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
    0.739
EDS75230.1
LysM domain protein; KEGG: aeh:Mlg_1995 5.1e-06 lytic transglycosylase, catalytic K08307; COG: COG3409 Putative peptidoglycan-binding domain-containing protein.
       0.546
ilvB
KEGG: chy:CHY_0517 2.1e-163 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652; COG: COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.507
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.