STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75267.1KEGG: fnu:FN0898 0.00030 hypothetical protein / Spore photoproduct K03716; COG: COG2315 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (223 aa)    
Predicted Functional Partners:
EDS75268.1
KEGG: oih:OB1952 2.4e-20 dgkA; diacylglycerol kinase K00901; COG: COG0818 Diacylglycerol kinase.
       0.596
EDS75266.1
KEGG: shn:Shewana3_3435 2.9e-09 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87; Belongs to the LysR transcriptional regulatory family.
       0.536
EDS75269.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
       0.475
EDS75270.1
Sporulation protein YunB (Spo_YunB); COG: NOG11559 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.475
EDS75265.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.413
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.