STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75270.1Sporulation protein YunB (Spo_YunB); COG: NOG11559 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (87 aa)    
Predicted Functional Partners:
EDS75269.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
  
 0.795
EDS75779.1
COG: COG2834 Outer membrane lipoprotein-sorting protein.
  
   
 0.711
EDS76100.1
dUTP diphosphatase; COG: COG4508 Uncharacterized protein conserved in bacteria.
  
     0.708
EDS74606.1
Putative spore coat protein GerQ; COG: NOG14257 non supervised orthologous group.
  
     0.643
EDS75271.1
Hypothetical protein.
       0.625
EDS76029.1
KEGG: sph:MGAS10270_Spy0282 3.5e-05 dnaB; replicative DNA helicase K01529; COG: COG3611 Replication initiation/membrane attachment protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.611
EDS75405.1
Hypothetical protein; KEGG: hso:HS_1631 5.9e-08 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03775; COG: COG3906 Uncharacterized protein conserved in bacteria; Belongs to the UPF0473 family.
  
     0.610
cotE
Spore coat protein E; COG: NOG09743 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.607
EDS75268.1
KEGG: oih:OB1952 2.4e-20 dgkA; diacylglycerol kinase K00901; COG: COG0818 Diacylglycerol kinase.
       0.605
sasPA
Small, acid-soluble spore protein A; COG: NOG16862 non supervised orthologous group; Psort location: Extracellular, score: 8.82.
  
     0.597
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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