STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74850.1ABC transporter transmembrane region; KEGG: cch:Cag_0453 7.4e-88 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99. (617 aa)    
Predicted Functional Partners:
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.913
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
   
0.900
EDS74849.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 2.2e-63 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.889
EDS75550.1
KEGG: reh:H16_B0716 3.9e-98 dppF3; ABC-type transporter, ATPase component: PepT family; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
   
 
0.869
EDS74327.1
KEGG: lwe:lwe2133 1.8e-61 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
     
0.831
EDS74482.1
KEGG: lwe:lwe2133 5.8e-72 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
     
0.817
EDS74848.1
Transcriptional regulator, MarR family; KEGG: bfl:Bfl616 0.0043 gmk; guanylate kinase K00942; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
     
 0.775
EDS75638.1
ABC transporter, ATP-binding protein; KEGG: hpa:HPAG1_0365 9.7e-47 multidrug resistance protein K01509; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.706
EDS74271.1
ABC transporter, ATP-binding protein; KEGG: spd:SPD_0049 5.3e-55 comA; competence factor transporting ATP-binding/permease protein ComA; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.668
EDS73806.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 7.8e-45 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
     
0.554
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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