STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74853.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
EDS74854.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.529
EDS74855.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.516
EDS74856.1
COG: COG4652 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 9.99.
       0.516
EDS74857.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: sps:SPs0964 4.0e-34 putative spermidine / putrescine ABC transporter (ATP-binding protein) K02052; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
       0.516
EDS74852.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.431
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.