STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74858.1LytTr DNA-binding domain protein; KEGG: chu:CHU_3042 0.00019 two-component response regulator K02483; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 8.87. (219 aa)    
Predicted Functional Partners:
EDS75465.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 1.4e-34 yesM; two-component sensor kinase YesM K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.598
EDS74015.1
Hypothetical protein; KEGG: sep:SE1637 6.6e-15 accessory gene regulator C K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.540
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.483
EDS74857.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: sps:SPs0964 4.0e-34 putative spermidine / putrescine ABC transporter (ATP-binding protein) K02052; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
       0.457
EDS74855.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.456
EDS74856.1
COG: COG4652 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 9.99.
       0.456
EDS74854.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.445
EDS74014.1
LytTr DNA-binding domain protein; KEGG: wbr:WGLp088 0.0013 rne; ribonucleases G and E; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 9.98.
  
     0.437
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.