STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74862.1ABC transporter, ATP-binding protein; KEGG: ssp:SSP0244 8.2e-14 ABC-type polar amino acid transport system ATPase component K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00. (610 aa)    
Predicted Functional Partners:
EDS73805.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.976
EDS74565.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: bld:BLi02574 8.2e-34 yqiZ; similar to amino acid ABC transporter (ATP-binding protein); RBL04297 K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.744
EDS74327.1
KEGG: lwe:lwe2133 1.8e-61 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.689
EDS75247.1
KEGG: spr:spr0622 2.1e-28 glnQ; ABC transporter ATP-binding protein - glutamine transport K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
0.670
EDS75248.1
KEGG: lwe:lwe2133 1.3e-31 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.669
EDS75341.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
 0.644
EDS75340.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A5419 3.2e-32 lipoprotein releasing system, ATP-binding protein K02003; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.637
EDS75765.1
KEGG: noc:Noc_2142 1.0e-33 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
  0.632
EDS74863.1
Hypothetical protein.
       0.623
EDS74997.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A0126 1.6e-37 ABC transporter component K06020; COG: COG4555 ABC-type Na+ transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.618
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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