STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74934.1Hypothetical protein; KEGG: bja:blr0807 0.0058 succinate-semialdehyde dehydrogenase K00135; COG: COG2848 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87. (454 aa)    
Predicted Functional Partners:
EDS74933.1
ACT domain protein; KEGG: nph:NP5006A 6.0e-08 purU; formyltetrahydrofolate deformylase K01433; COG: COG3830 ACT domain-containing protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0237 family.
 
     0.951
EDS74935.1
Hypothetical protein; COG: COG2607 Predicted ATPase (AAA+ superfamily).
       0.645
EDS74936.1
Hypothetical protein; KEGG: fnu:FN1041 2.0e-14 acetyltransferase K00680; COG: COG4866 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.645
EDS74932.1
KEGG: lmf:LMOf2365_2752 2.9e-22 PTS system, cellobiose-specific, IIB component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB.
       0.491
EDS74937.1
COG: COG4905 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.448
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.