STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74972.1PHP domain protein; KEGG: btl:BALH_4780 3.7e-31 epsC; capsular polysaccharide biosynthesis protein K01104; COG: COG4464 Capsular polysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 8.87. (246 aa)    
Predicted Functional Partners:
EDS74973.1
Chain length determinant protein; KEGG: chu:CHU_0880 6.0e-28 wzc; tyrosine-protein kinase K08252; COG: COG3944 Capsular polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.987
EDS74974.1
Chain length determinant protein; KEGG: ava:Ava_1045 1.3e-29 lipopolysaccharide biosynthesis K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.987
EDS74235.1
Chain length determinant protein; KEGG: nca:Noca_4185 3.0e-14 lipopolysaccharide biosynthesis; COG: COG3944 Capsular polysaccharide biosynthesis protein.
 
 
 0.905
EDS74233.1
Capsular exopolysaccharide family; KEGG: bcl:ABC3815 5.3e-39 tyrosine-protein kinase K00903; COG: COG0489 ATPases involved in chromosome partitioning; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.857
EDS74975.1
Hypothetical protein; KEGG: bce:BC2506 1.7e-09 bacillolysin K01400; COG: COG3227 Zinc metalloprotease (elastase); Psort location: Cytoplasmic, score: 8.87.
 
     0.809
EDS74971.1
Cell envelope-like function transcriptional attenuator common domain protein; COG: COG1316 Transcriptional regulator; Psort location: CytoplasmicMembrane, score: 9.26.
  
  
 0.791
EDS74976.1
KEGG: reh:H16_A0776 1.6e-48 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.761
EDS74977.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.727
EDS74979.1
Radical SAM domain protein; KEGG: dps:DP0065 7.3e-08 pflA; related to pyruvate formate-lyase activating enzyme K04069; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score: 8.87.
 
     0.544
EDS74451.1
Hypothetical protein; KEGG: fal:FRAAL1277 1.4e-06 serine/threonine-protein kinase (switch protein/serine kinase) (anti-sigma B factor RsbT) K08282; COG: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); Psort location: Cytoplasmic, score: 8.87.
    
   0.543
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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