STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74975.1Hypothetical protein; KEGG: bce:BC2506 1.7e-09 bacillolysin K01400; COG: COG3227 Zinc metalloprotease (elastase); Psort location: Cytoplasmic, score: 8.87. (292 aa)    
Predicted Functional Partners:
EDS74976.1
KEGG: reh:H16_A0776 1.6e-48 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.945
EDS74977.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.944
EDS74974.1
Chain length determinant protein; KEGG: ava:Ava_1045 1.3e-29 lipopolysaccharide biosynthesis K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.904
EDS74973.1
Chain length determinant protein; KEGG: chu:CHU_0880 6.0e-28 wzc; tyrosine-protein kinase K08252; COG: COG3944 Capsular polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.897
EDS74979.1
Radical SAM domain protein; KEGG: dps:DP0065 7.3e-08 pflA; related to pyruvate formate-lyase activating enzyme K04069; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score: 8.87.
 
     0.837
EDS74972.1
PHP domain protein; KEGG: btl:BALH_4780 3.7e-31 epsC; capsular polysaccharide biosynthesis protein K01104; COG: COG4464 Capsular polysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.809
EDS74983.1
Hypothetical protein; KEGG: bbu:BB0420 0.00095 sensory transduction histidine kinase, putative K02489; COG: NOG21821 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.791
EDS74971.1
Cell envelope-like function transcriptional attenuator common domain protein; COG: COG1316 Transcriptional regulator; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.735
EDS75634.1
Hypothetical protein; COG: NOG21821 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.594
EDS75635.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.579
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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