STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74994.1NLPA lipoprotein; KEGG: sha:SH1121 0.00041 prsA; peptidyl-prolyl cis/trans isomerase K01802; COG: COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family. (272 aa)    
Predicted Functional Partners:
EDS74995.1
ABC transporter, permease protein; KEGG: baa:BA_0884 2.8e-40 binding-protein-dependent transport systems inner membrane component K00294; COG: COG2011 ABC-type metal ion transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 0.999
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.999
EDS74993.1
Cof-like hydrolase; KEGG: spz:M5005_Spy_1331 1.6e-18 peptidyl-prolyl cis-trans isomerase K01802; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
  
    0.748
EDS74130.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; KEGG: gka:GK0284 6.0e-118 O-acetylhomoserine sulfhydrylase K01740; COG: COG2873 O-acetylhomoserine sulfhydrylase; Psort location: Cytoplasmic, score: 9.98.
  
    0.614
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.441
EDS75047.1
KEGG: hpa:HPAG1_0922 1.7e-26 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 9.70.
  
 
 0.412
EDS74027.1
KEGG: sha:SH1764 0.0051 blaZ; beta-lactamase K01467; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 
 0.412
EDS74029.1
ABC transporter, permease protein; KEGG: bja:blr4464 6.7e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.412
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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