STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75009.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (172 aa)    
Predicted Functional Partners:
EDS75008.1
Hypothetical protein; KEGG: pfa:PF14_0278 0.0045 ATP-dependent DNA helicase, putative K01509; Psort location: Cytoplasmic, score: 8.87.
       0.545
EDS75006.1
Putative dipicolinic acid synthetase, B subunit; KEGG: bcz:BCZK3561 2.9e-38 dapB; dipicolinate synthase subunit B K06411; COG: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; Psort location: Cytoplasmic, score: 8.87.
       0.431
EDS75007.1
KEGG: bcz:BCZK3562 8.0e-08 dapA; dipicolinate synthase subunit A K06410; COG: NOG06157 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.431
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.