STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75022.1COG: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family. (169 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase; KEGG: ftl:FTL_0488 6.0e-118 4-alpha-glucanotransferase K00705; COG: COG1640 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.98.
     
 0.774
EDS75024.1
Hypothetical protein; COG: NOG10982 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS75028.1
Hypothetical protein; KEGG: lsl:LSL_1510 5.2e-16 pncA; pyrazinamidase / nicotinamidase K01463:K01440; COG: COG1335 Amidases related to nicotinamidase.
  
 
 0.696
feoB-2
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.620
EDS75026.1
FeoA domain protein; COG: COG1918 Fe2+ transport system protein A; Psort location: Cytoplasmic, score: 8.87.
       0.618
EDS75027.1
Metallo-beta-lactamase domain protein; KEGG: afu:AF0939 2.2e-07 ribonuclease Z K00784; COG: COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; Psort location: Cytoplasmic, score: 8.87.
       0.618
EDS75021.1
Conserved hypothetical protein TIGR03982; COG: COG2323 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 7.63.
       0.612
EDS74965.1
Rubredoxin; KEGG: syn:sll0550 3.3e-46 flavoprotein; COG: COG0426 Uncharacterized flavoproteins; Psort location: Cytoplasmic, score: 8.87.
    
 0.532
EDS74410.1
Glyoxalase family protein; KEGG: bth:BT1580 1.0e-42 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.509
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate.
  
 
  0.454
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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