STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75037.1Hypothetical protein; COG: NOG10993 non supervised orthologous group. (395 aa)    
Predicted Functional Partners:
EDS75036.1
Hypothetical protein; KEGG: tvo:TVN0279 0.0062 putative ribonuclease P subunit RPR2 K03540; COG: NOG18757 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
       0.642
EDS75038.1
HD domain protein; COG: COG1896 Predicted hydrolases of HD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.527
EDS75344.1
SNARE-like domain protein; KEGG: pat:Patl_3732 0.0074 phospholipase D K01115; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.456
EDS75938.1
Putative phage DNA packaging protein; COG: COG1376 Uncharacterized protein conserved in bacteria.
 
     0.427
EDS74027.1
KEGG: sha:SH1764 0.0051 blaZ; beta-lactamase K01467; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
     0.405
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.