Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDS75045.1MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. (443 aa)    
Predicted Functional Partners:
EDS75044.1
KEGG: pmn:PMN2A_1075 7.9e-68 translation elongation factor G:small GTP-binding protein domain K02355; COG: COG0480 Translation elongation factors (GTPases); Psort location: Cytoplasmic, score: 9.98.
  
    0.619
EDS75043.1
Hypothetical protein.
       0.615
EDS75047.1
KEGG: hpa:HPAG1_0922 1.7e-26 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 9.70.
  
    0.552
EDS75046.1
KEGG: efa:EF0246 1.5e-80 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.543
EDS75639.1
Hypothetical protein; COG: COG1434 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.497
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
   0.436
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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