STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75046.1KEGG: efa:EF0246 1.5e-80 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (245 aa)    
Predicted Functional Partners:
EDS75047.1
KEGG: hpa:HPAG1_0922 1.7e-26 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 9.70.
 0.998
EDS75292.1
ABC transporter, permease protein; KEGG: ret:RHE_PF00254 5.0e-29 glnP, glnQ; glutamine ABC transporter, ATP-binding protein K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 0.997
EDS74029.1
ABC transporter, permease protein; KEGG: bja:blr4464 6.7e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 0.997
EDS74027.1
KEGG: sha:SH1764 0.0051 blaZ; beta-lactamase K01467; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.978
EDS75293.1
KEGG: hpa:HPAG1_1111 1.4e-15 glutamine ABC transporter, periplasmic glutamine-binding protein K05359; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 9.87.
 
 0.938
EDS74110.1
KEGG: reh:H16_A3653 3.3e-28 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
 0.907
EDS73842.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 4.2e-69 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.900
EDS73876.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1962 1.2e-64 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.900
EDS73841.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 6.3e-91 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
     
0.899
EDS73877.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0716 1.1e-70 ATPase K06148; COG: COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.898
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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