STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74789.1Hypothetical protein; COG: COG2966 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99. (249 aa)    
Predicted Functional Partners:
EDS74788.1
Hypothetical protein; COG: COG3610 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.979
tmcAL
Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
       0.775
EDS74790.1
Hypothetical protein; KEGG: dps:DP0920 1.0e-12 probable methylated-DNA-protein-cysteine methyltransferase K00567; COG: COG0350 Methylated DNA-protein cysteine methyltransferase.
       0.522
EDS75694.1
SNARE-like domain protein; KEGG: lsl:LSL_1322 0.00067 alkaline phosphatase K01077; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.404
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.