Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDS74817.1 | EDS74818.1 | CLOSPI_01402 | CLOSPI_01403 | Hypothetical protein; KEGG: pub:SAR11_0505 0.0052 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0342 family. | KEGG: lmf:LMOf2365_0150 3.1e-215 inosine-5'-monophosphate dehydrogenase, putative K00088; COG: COG0516 IMP dehydrogenase/GMP reductase; Psort location: Cytoplasmic, score: 8.87. | 0.571 |
| EDS74817.1 | miaB | CLOSPI_01402 | CLOSPI_01401 | Hypothetical protein; KEGG: pub:SAR11_0505 0.0052 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0342 family. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.777 |
| EDS74817.1 | spoVS | CLOSPI_01402 | CLOSPI_01400 | Hypothetical protein; KEGG: pub:SAR11_0505 0.0052 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0342 family. | COG: COG2359 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. | 0.453 |
| EDS74818.1 | EDS74817.1 | CLOSPI_01403 | CLOSPI_01402 | KEGG: lmf:LMOf2365_0150 3.1e-215 inosine-5'-monophosphate dehydrogenase, putative K00088; COG: COG0516 IMP dehydrogenase/GMP reductase; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein; KEGG: pub:SAR11_0505 0.0052 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0342 family. | 0.571 |
| EDS74818.1 | miaB | CLOSPI_01403 | CLOSPI_01401 | KEGG: lmf:LMOf2365_0150 3.1e-215 inosine-5'-monophosphate dehydrogenase, putative K00088; COG: COG0516 IMP dehydrogenase/GMP reductase; Psort location: Cytoplasmic, score: 8.87. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.590 |
| miaB | EDS74817.1 | CLOSPI_01401 | CLOSPI_01402 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Hypothetical protein; KEGG: pub:SAR11_0505 0.0052 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0342 family. | 0.777 |
| miaB | EDS74818.1 | CLOSPI_01401 | CLOSPI_01403 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | KEGG: lmf:LMOf2365_0150 3.1e-215 inosine-5'-monophosphate dehydrogenase, putative K00088; COG: COG0516 IMP dehydrogenase/GMP reductase; Psort location: Cytoplasmic, score: 8.87. | 0.590 |
| miaB | spoVS | CLOSPI_01401 | CLOSPI_01400 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | COG: COG2359 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. | 0.503 |
| spoVS | EDS74817.1 | CLOSPI_01400 | CLOSPI_01402 | COG: COG2359 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein; KEGG: pub:SAR11_0505 0.0052 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0342 family. | 0.453 |
| spoVS | miaB | CLOSPI_01400 | CLOSPI_01401 | COG: COG2359 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.503 |