STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74641.12Fe-2S iron-sulfur cluster-binding domain protein; KEGG: mag:amb2019 7.9e-29 4-hydroxybenzoyl-CoA reductase gamma subunit K04107; COG: COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Psort location: Cytoplasmic, score: 8.87. (154 aa)    
Predicted Functional Partners:
EDS74640.1
KEGG: mta:Moth_1960 2.1e-124 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K00087; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score: 9.49.
 0.999
EDS74642.1
FAD binding domain in molybdopterin dehydrogenase; KEGG: sai:Saci_2269 2.1e-10 cutB; carbon monoxide dehydrogenase medium chain K03519; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; Psort location: Cytoplasmic, score: 8.87.
 
 0.999
EDS74639.1
Hypothetical protein; KEGG: hma:pNG7236 8.8e-14 glmU; UDP-N-acetylglucosamine pyrophosphorylase K00972; COG: COG2068 Uncharacterized MobA-related protein.
 
 
 0.980
yqeC
Putative selenium-dependent hydroxylase accessory protein YqeC; COG: NOG06790 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.858
EDS74643.1
Putative permease; KEGG: rba:RB11063 0.00015 sul1, sul2; probable sulfate transporter K01672; COG: COG2233 Xanthine/uracil permeases; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.844
EDS74647.1
Hypothetical protein; COG: COG1618 Predicted nucleotide kinase.
 
     0.823
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.788
EDS74646.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
       0.778
EDS74645.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.777
EDS74644.1
ABC transporter, ATP-binding protein; KEGG: mmp:MMP0198 1.4e-31 ABC-type iron(III) transport system, ATP binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
       0.776
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.