STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74644.1ABC transporter, ATP-binding protein; KEGG: mmp:MMP0198 1.4e-31 ABC-type iron(III) transport system, ATP binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49. (253 aa)    
Predicted Functional Partners:
EDS74645.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.990
EDS74646.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.981
EDS75671.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bxe:Bxe_A4149 0.0022 cytochrome bd ubiquinol oxidase, subunit II K00426; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.945
isdE
Heme ABC transporter, heme-binding protein isdE; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.868
EDS75668.1
Iron transport-associated domain protein; COG: COG5386 Cell surface protein.
  
 0.840
EDS74647.1
Hypothetical protein; COG: COG1618 Predicted nucleotide kinase.
 
     0.832
EDS74642.1
FAD binding domain in molybdopterin dehydrogenase; KEGG: sai:Saci_2269 2.1e-10 cutB; carbon monoxide dehydrogenase medium chain K03519; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.802
EDS74643.1
Putative permease; KEGG: rba:RB11063 0.00015 sul1, sul2; probable sulfate transporter K01672; COG: COG2233 Xanthine/uracil permeases; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.797
EDS74637.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: stm:STM2445 2.8e-81 ucpA; putative oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98.
 
   
 0.778
EDS74639.1
Hypothetical protein; KEGG: hma:pNG7236 8.8e-14 glmU; UDP-N-acetylglucosamine pyrophosphorylase K00972; COG: COG2068 Uncharacterized MobA-related protein.
       0.778
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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