STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74656.1Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (216 aa)    
Predicted Functional Partners:
EDS74657.1
KEGG: afu:AF1021 2.4e-27 ABC transporter, ATP-binding protein K02017; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.951
EDS74658.1
KEGG: bcz:BCZK3833 8.8e-14 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
    0.904
EDS75398.1
Hypothetical protein; COG: NOG28550 non supervised orthologous group.
  
     0.662
EDS74486.1
KEGG: hpa:HPAG1_1162 5.5e-28 ABC transporter, ATP-binding protein K06022; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.599
EDS73796.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.597
EDS73804.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.590
EDS75733.1
LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_3450 0.00077 CHU large protein; uncharacterized K01238; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 8.99.
  
     0.540
EDS74659.1
MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99.
       0.524
EDS74655.1
Hypothetical protein.
       0.516
EDS74117.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE0191 1.9e-12 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
  
     0.436
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.