STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtcACell wall teichoic acid glycosylation protein GtcA; KEGG: ehi:167.t00003 5.4e-07 dolichol monophosphate mannose synthase, putative K00721; COG: COG2246 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.26. (133 aa)    
Predicted Functional Partners:
EDS74673.1
Hypothetical protein; KEGG: ddi:DDB0229429 3.9e-05 putative CMGC family protein kinase K08825; COG: COG4485 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.949
EDS74671.1
Glycosyltransferase, group 2 family protein; KEGG: lsa:LSA1519 5.3e-78 putative teichoic acid/polysaccharide glycosyl transferase, family 2 K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: CytoplasmicMembrane, score: 9.75.
 
  
 0.889
EDS75817.1
Class II glutamine amidotransferase; KEGG: syn:sll1502 0. gltB; NADH-dependent glutamate synthase large subunit K00268; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score: 8.87.
     
 0.442
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.