STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74691.1BNR/Asp-box repeat protein; KEGG: rba:RB3353 4.6e-10 sialidase [precursor] K01186; COG: NOG23393 non supervised orthologous group; Psort location: Extracellular, score: 9.98. (1963 aa)    
Predicted Functional Partners:
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
     0.704
EDS74318.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
     0.679
EDS75975.1
Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase.
 
     0.677
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
     0.670
EDS73902.1
Hypothetical protein; KEGG: cpe:CPE0191 6.3e-08 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group.
 
    0.654
EDS75774.1
F5/8 type C domain protein; KEGG: eci:UTI89_C1098 4.8e-34 hypothetical protein K01189; COG: NOG25149 non supervised orthologous group; Psort location: Extracellular, score: 9.98.
  
     0.630
nagJ
O-GlcNAcase NagJ; KEGG: cpe:CPE0191 4.1e-65 nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Cellwall, score: 9.49.
  
    0.616
EDS75323.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpf:CPF_0184 6.6e-07 nagH; hyaluronidase K01197; COG: NOG38526 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
 
   
 0.580
EDS73901.1
Hypothetical protein; KEGG: cpe:CPE0191 1.7e-07 nagH; hyaluronoglucosaminidase K01197; COG: COG1409 Predicted phosphohydrolases.
  
     0.506
EDS73884.1
LPXTG-motif cell wall anchor domain protein; KEGG: tte:TTE0006 1.3e-34 Alpha-glucosidases, family 31 of glycosyl hydrolases K01187; COG: COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Psort location: Extracellular, score: 9.75.
 
    0.493
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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