STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74698.1Hypothetical protein; KEGG: cpe:CPE1907 0.0030 patA; probable asparate aminotransferase K00821; Psort location: Cytoplasmic, score: 8.87. (116 aa)    
Predicted Functional Partners:
EDS74699.1
KEGG: cpf:CPF_2374 3.9e-50 selD; selenide, water dikinase K01008; COG: COG0709 Selenophosphate synthase; Psort location: Cytoplasmic, score: 8.87.
       0.642
EDS74700.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.642
yqeC
Putative selenium-dependent hydroxylase accessory protein YqeC; COG: NOG06790 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.472
EDS74697.1
Hypothetical protein; COG: NOG14194 non supervised orthologous group.
       0.437
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.